Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Alicycliphilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Alicycliphilus |
| Species | Alicycliphilus denitrificans |
| Strain | BC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Alicycliphilus denitrificans BC
Accession NumberNC_014908.1
Gene Summary
Adenine Count
25582 bp
Thymine Count
24340 bp
Guanine Count
35485 bp
Cytosine Count
34311 bp
Genome Length
119718 bp
Protein-coding Genes
121 genes
Non-Coding Genes
16 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conjugative transfer signal peptidase traf | ALIDE_RS22560 | Not Available | - | 7341 - 7877 | 18847.9 |
| type iv secretory system conjugative dna transfer family protein | ALIDE_RS22565 | Not Available | - | 7874 - 9787 | 69901.1 |
| trai/moba(p) family conjugative relaxase | ALIDE_RS22570 | Not Available | - | 9784 - 12024 | 82073.6 |
| conjugal transfer transcriptional regulator traj | ALIDE_RS22575 | Not Available | - | 12059 - 12433 | 14207.2 |
| trak family protein | ALIDE_RS22580 | Not Available | + | 12807 - 13205 | 14622.5 |
| arsa-related p-loop atpase | ALIDE_RS22585 | Not Available | + | 13205 - 13930 | 26386.9 |
| conjugal transfer protein tram | ALIDE_RS22590 | Not Available | + | 13930 - 14370 | 15581.9 |
| incp plasmid survival protein kfrc | ALIDE_RS22595 | Not Available | - | 14573 - 15226 | 24053.3 |
| incp plasmid survival protein kfrb | ALIDE_RS22600 | Not Available | - | 15255 - 15602 | 12486.0 |
| dna-binding protein | ALIDE_RS22605 | Not Available | - | 15773 - 16804 | 36784.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.