Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Alicycliphilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Alicycliphilus |
| Species | Alicycliphilus denitrificans |
| Strain | BC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Alicycliphilus denitrificans BC
Accession NumberNC_014908.1
Gene Summary
Adenine Count
25582 bp
Thymine Count
24340 bp
Guanine Count
35485 bp
Cytosine Count
34311 bp
Genome Length
119718 bp
Protein-coding Genes
121 genes
Non-Coding Genes
16 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4158 domain-containing protein | ALIDE_RS24875 | Not Available | + | 110521 - 110979 | 17761.0 |
| tn3 family transposase | ALIDE_RS22515 | Not Available | + | 111461 - 113551 | 79175.0 |
| site-specific integrase | ALIDE_RS23815 | Not Available | + | 113600 - 114016 | 14913.7 |
| duf4158 domain-containing protein | ALIDE_RS22525 | Not Available | - | 114257 - 114895 | 24190.3 |
| conjugative transfer protein mobi(a/c) | ALIDE_RS22530 | Not Available | + | 116314 - 116775 | 17476.9 |
| hypothetical protein | ALIDE_RS22535 | Not Available | + | 117039 - 117539 | 18280.6 |
| replication initiation protein | ALIDE_RS22540 | Not Available | - | 117756 - 119066 | 48465.3 |
| zincin-like metallopeptidase domain-containing protein | ALIDE_RS22545 | Not Available | - | 505 - 4851 | 158946.0 |
| protein trad | ALIDE_RS22550 | Not Available | - | 4855 - 5244 | 13601.3 |
| dna topoisomerase iii | ALIDE_RS22555 | Not Available | - | 5266 - 7329 | 74872.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.