Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Alicycliphilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Alicycliphilus |
| Species | Alicycliphilus denitrificans |
| Strain | BC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Alicycliphilus denitrificans BC
Accession NumberNC_014908.1
Gene Summary
Adenine Count
25582 bp
Thymine Count
24340 bp
Guanine Count
35485 bp
Cytosine Count
34311 bp
Genome Length
119718 bp
Protein-coding Genes
121 genes
Non-Coding Genes
16 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | ALIDE_RS01320 | Not Available | - | 296512 - 296895 | 14339.7 |
| hypothetical protein | ALIDE_RS24885 | Not Available | - | 296921 - 297043 | 4257.25 |
| yifb family mg chelatase-like aaa atpase | ALIDE_RS01325 | Not Available | - | 297101 - 298636 | 53623.6 |
| torf family putative porin | ALIDE_RS01330 | Not Available | + | 298775 - 299506 | 25593.1 |
| p-ii family nitrogen regulator | ALIDE_RS01335 | Not Available | + | 299526 - 299864 | 12114.7 |
| ammonium transporter | ALIDE_RS01340 | Not Available | + | 299887 - 301275 | 46871.5 |
| lysr substrate-binding domain-containing protein | ALIDE_RS01345 | Not Available | + | 301369 - 302247 | 32204.2 |
| nad(p)-dependent oxidoreductase | ALIDE_RS01350 | Not Available | - | 302321 - 303196 | 29968.7 |
| nad-dependent succinate-semialdehyde dehydrogenase | ALIDE_RS01355 | Not Available | - | 303193 - 304623 | 50518.4 |
| bug family tripartite tricarboxylate transporter substrate binding protein | ALIDE_RS01360 | Not Available | - | 304623 - 305603 | 33880.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.