Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Alicycliphilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Alicycliphilus |
| Species | Alicycliphilus denitrificans |
| Strain | BC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Alicycliphilus denitrificans BC
Accession NumberNC_014908.1
Gene Summary
Adenine Count
25582 bp
Thymine Count
24340 bp
Guanine Count
35485 bp
Cytosine Count
34311 bp
Genome Length
119718 bp
Protein-coding Genes
121 genes
Non-Coding Genes
16 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii crispr rna-guided endonuclease cas9 | ALIDE_RS01030 | Not Available | + | 228371 - 231460 | 116242.0 |
| type ii crispr-associated endonuclease cas1 | ALIDE_RS01035 | Not Available | + | 231466 - 232395 | 33459.6 |
| crispr-associated endonuclease cas2 | ALIDE_RS01040 | Not Available | + | 232417 - 232743 | 12562.2 |
| histidine kinase dimerization/phospho-acceptor domain-containing protein | ALIDE_RS01045 | Not Available | - | 233453 - 233696 | 8626.45 |
| trbi/virb10 family protein | ALIDE_RS01050 | Not Available | - | 233693 - 234955 | 44337.7 |
| p-type conjugative transfer protein trbg | ALIDE_RS01055 | Not Available | - | 234957 - 235937 | 35376.6 |
| conjugal transfer protein trbf | ALIDE_RS01060 | Not Available | - | 235934 - 236638 | 26211.1 |
| p-type conjugative transfer protein trbl | ALIDE_RS01065 | Not Available | - | 236657 - 237991 | 44788.6 |
| p-type conjugative transfer protein trbj | ALIDE_RS01070 | Not Available | - | 238004 - 238729 | 26738.8 |
| conjugal transfer protein trbe | ALIDE_RS01075 | Not Available | - | 238726 - 241161 | 89822.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.