Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Alicycliphilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Alicycliphilus |
| Species | Alicycliphilus denitrificans |
| Strain | BC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Alicycliphilus denitrificans BC
Accession NumberNC_014908.1
Gene Summary
Adenine Count
25582 bp
Thymine Count
24340 bp
Guanine Count
35485 bp
Cytosine Count
34311 bp
Genome Length
119718 bp
Protein-coding Genes
121 genes
Non-Coding Genes
16 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-amino acid dehydrogenase | ALIDE_RS21895 | Not Available | + | 4618346 - 4619557 | 42533.4 |
| lysr substrate-binding domain-containing protein | ALIDE_RS21900 | Not Available | - | 4619561 - 4620466 | 32379.8 |
| aspartate/glutamate racemase family protein | ALIDE_RS21905 | Not Available | - | 4620494 - 4621234 | 26048.6 |
| m55 family metallopeptidase | ALIDE_RS21910 | Not Available | - | 4621231 - 4622049 | 28538.3 |
| p1 family peptidase | ALIDE_RS21915 | Not Available | - | 4622114 - 4623151 | 35877.3 |
| glutathione abc transporter permease gsid | ALIDE_RS21920 | Not Available | - | 4623148 - 4624056 | 32546.1 |
| glutathione abc transporter permease gsic | ALIDE_RS21925 | Not Available | - | 4624064 - 4624984 | 33954.6 |
| glutathione abc transporter substrate-binding protein gsib | ALIDE_RS21930 | Not Available | - | 4625053 - 4626597 | 56908.2 |
| dipeptide abc transporter atp-binding protein | ALIDE_RS21935 | Not Available | - | 4626689 - 4628563 | 68478.4 |
| isoaspartyl peptidase/l-asparaginase family protein | ALIDE_RS21940 | Not Available | - | 4628580 - 4629578 | 33341.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.