Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Alicycliphilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Alicycliphilus |
| Species | Alicycliphilus denitrificans |
| Strain | BC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Alicycliphilus denitrificans BC
Accession NumberNC_014908.1
Gene Summary
Adenine Count
25582 bp
Thymine Count
24340 bp
Guanine Count
35485 bp
Cytosine Count
34311 bp
Genome Length
119718 bp
Protein-coding Genes
121 genes
Non-Coding Genes
16 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-lactate permease | ALIDE_RS21370 | Not Available | - | 4500874 - 4502535 | 59146.8 |
| trna 2-thiouridine(34) synthase mnma | ALIDE_RS21375 | Not Available | - | 4502775 - 4503896 | 40919.6 |
| lysr family transcriptional regulator | ALIDE_RS21380 | Not Available | - | 4503893 - 4504834 | 34528.1 |
| 4-oxalomesaconate tautomerase | ALIDE_RS21385 | Not Available | + | 4504938 - 4506026 | 38051.9 |
| bug family tripartite tricarboxylate transporter substrate binding protein | ALIDE_RS21390 | Not Available | + | 4506079 - 4507068 | 34555.0 |
| porin | ALIDE_RS21395 | Not Available | + | 4507090 - 4508175 | 37453.9 |
| lysr substrate-binding domain-containing protein | ALIDE_RS21400 | Not Available | + | 4508253 - 4509197 | 33541.8 |
| fad-dependent tricarballylate dehydrogenase tcua | ALIDE_RS21405 | Not Available | + | 4509435 - 4510871 | 51877.6 |
| tricarballylate utilization 4fe-4s protein tcub | ALIDE_RS21410 | Not Available | + | 4510858 - 4512045 | 42342.6 |
| bug family tripartite tricarboxylate transporter substrate binding protein | ALIDE_RS21415 | Not Available | + | 4512131 - 4513108 | 33974.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.