Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Alicycliphilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Alicycliphilus |
| Species | Alicycliphilus denitrificans |
| Strain | BC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Alicycliphilus denitrificans BC
Accession NumberNC_014908.1
Gene Summary
Adenine Count
25582 bp
Thymine Count
24340 bp
Guanine Count
35485 bp
Cytosine Count
34311 bp
Genome Length
119718 bp
Protein-coding Genes
121 genes
Non-Coding Genes
16 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative 2-aminoethylphosphonate abc transporter substrate-binding protein | ALIDE_RS20980 | Not Available | - | 4410369 - 4411406 | 38059.6 |
| phosphonate utilization associated transcriptional regulator | ALIDE_RS20985 | Not Available | + | 4411549 - 4412277 | 26599.8 |
| phosphonoacetate hydrolase | ALIDE_RS20990 | Not Available | + | 4412279 - 4413514 | 44300.1 |
| phosphonoacetaldehyde dehydrogenase | ALIDE_RS20995 | Not Available | + | 4413545 - 4414993 | 53262.2 |
| phosphonate degradation hd-domain oxygenase | ALIDE_RS21000 | Not Available | + | 4414999 - 4415538 | 19341.9 |
| fad-dependent oxidoreductase | ALIDE_RS21005 | Not Available | + | 4415636 - 4417024 | 49477.3 |
| alanine racemase | ALIDE_RS21010 | Not Available | - | 4417163 - 4418239 | 37771.6 |
| d-amino acid dehydrogenase | ALIDE_RS21015 | Not Available | - | 4418236 - 4419546 | 47452.2 |
| winged helix-turn-helix transcriptional regulator | ALIDE_RS21020 | Not Available | + | 4419673 - 4420185 | 18768.8 |
| marr family winged helix-turn-helix transcriptional regulator | ALIDE_RS21025 | Not Available | - | 4420170 - 4420649 | 17334.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.