Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Alicycliphilus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Alicycliphilus |
| Species | Alicycliphilus denitrificans |
| Strain | BC |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Alicycliphilus denitrificans BC
Accession NumberNC_014908.1
Gene Summary
Adenine Count
25582 bp
Thymine Count
24340 bp
Guanine Count
35485 bp
Cytosine Count
34311 bp
Genome Length
119718 bp
Protein-coding Genes
121 genes
Non-Coding Genes
16 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | ALIDE_RS18575 | Not Available | + | 3897701 - 3898150 | 16625.0 |
| lysr family transcriptional regulator | ALIDE_RS18580 | Not Available | - | 3898189 - 3899091 | 32630.0 |
| hpch/hpai aldolase/citrate lyase family protein | ALIDE_RS18585 | Not Available | + | 3899161 - 3900030 | 30495.5 |
| tripartite tricarboxylate transporter substrate binding protein | ALIDE_RS18590 | Not Available | + | 3900058 - 3901035 | 34326.4 |
| coa transferase | ALIDE_RS18595 | Not Available | + | 3901099 - 3902268 | 41892.2 |
| amidohydrolase family protein | ALIDE_RS18600 | Not Available | + | 3902265 - 3903107 | 31051.2 |
| tripartite tricarboxylate transporter substrate binding protein | ALIDE_RS18605 | Not Available | + | 3903124 - 3904080 | 33090.6 |
| marr family winged helix-turn-helix transcriptional regulator | ALIDE_RS18610 | Not Available | - | 3904135 - 3904641 | 18852.3 |
| 2-hydroxycyclohexanecarboxyl-coa dehydrogenase | ALIDE_RS18615 | Not Available | + | 3904772 - 3905539 | 25783.9 |
| 2-ketocyclohexanecarboxyl-coa hydrolase | ALIDE_RS18620 | Not Available | + | 3905583 - 3906365 | 28379.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.