Agromyces atrinae str. DSM 23870

rodaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Agromyces

Description

Agromyces atrinae strain DSM 23870 is a Gram-positive, rod-shaped bacterium characterized by its aerobic metabolism and optimal growth at a temperature of 29.0°C. This microbe belongs to the genus Agromyces, which is known for its diverse ecological roles and ability to thrive in various environments. The Gram-positive nature of A. atrinae indicates the presence of a thick peptidoglycan layer in its cell wall, a feature that may confer advantages in specific environmental conditions, including resistance to certain external stressors. The rod shape of this organism is typical among many members of the Actinobacteria phylum, suggesting a potential for filamentous growth under certain circumstances, although such growth has not been specifically documented for this strain. As an aerobic organism, A. atrinae relies on oxygen for its metabolic processes, which may influence its ecological niche, likely favoring environments where oxygen is readily available. The optimal growth temperature of 29.0°C suggests a preference for moderate temperatures, potentially aligning with habitats such as soil or decomposing organic matter, where microbial activity is prevalent. Overall, Agromyces atrinae str. DSM 23870 exemplifies the functional diversity within the Agromyces genus, and its traits may contribute to its role in nutrient cycling, particularly in warm, oxygen-rich environments. Further studies could elucidate its specific ecological functions and interactions within microbial communities.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusAgromyces
SpeciesAgromyces atrinae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agromyces atrinae str. DSM 23870

Accession NumberSDPM00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3458 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
type ii toxin-antitoxin system vapc family toxinESP50_00140Not Available-33168 - 3359315759.8
plasmid stabilization proteinESP50_00145Not Available-33590 - 338268223.81
glycosidaseESP50_00150Not Available-33938 - 3544052859.8
hypothetical proteinESP50_00155Not Available-35763 - 3648526620.2
sulfurtransferaseESP50_00160Not Available+36731 - 3757929420.2
hypothetical proteinESP50_00165Not Available-37582 - 3812718702.3
hypothetical proteinESP50_00170Not Available-38313 - 43280172585.0
endonuclease/exonuclease/phosphatase family proteinESP50_00175Not Available-43392 - 4409626240.4
hypothetical proteinESP50_00180Not Available-44173 - 4536341128.4
zinc abc transporter substrate-binding proteinESP50_00185Not Available-45416 - 4632431396.8

Displaying genes 31 – 40 of 3511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites