Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Agromyces
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Agromyces |
| Species | Agromyces atrinae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agromyces atrinae str. DSM 23870
Accession NumberSDPM00000000.1
Gene Summary
Adenine Count
593037 bp
Thymine Count
598634 bp
Guanine Count
1335443 bp
Cytosine Count
1329680 bp
Genome Length
3858615 bp
Protein-coding Genes
3458 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tat pathway signal sequence domain protein | ESP50_16005 | Not Available | - | 3443493 - 3446138 | 97267.4 |
| duf1961 family protein | ESP50_16010 | Not Available | - | 3446135 - 3446779 | 23866.0 |
| carbohydrate abc transporter permease | ESP50_16015 | Not Available | - | 3446776 - 3447657 | 32398.5 |
| sugar abc transporter permease | ESP50_16020 | Not Available | - | 3447657 - 3448625 | 36038.5 |
| extracellular solute-binding protein | ESP50_16025 | Not Available | - | 3448682 - 3450211 | 54866.8 |
| duf624 domain-containing protein | ESP50_16030 | Not Available | - | 3450273 - 3451025 | 26913.2 |
| laci family transcriptional regulator | ESP50_16035 | Not Available | - | 3451258 - 3452499 | 44071.4 |
| gfo/idh/moca family oxidoreductase | ESP50_16040 | Not Available | + | 3452489 - 3453829 | 48774.0 |
| aldehyde dehydrogenase (nadp(+)) | ESP50_16045 | Not Available | - | 3454120 - 3455556 | 49095.3 |
| mandelate racemase/muconate lactonizing enzyme family protein | ESP50_16050 | Not Available | - | 3455660 - 3456721 | 37777.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.