Pantoea sp. At-9b

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. (strain At-9b) is a cellulose-degrading Gram-negative bacterium isolated from the fungus gardens of Atta cephalotes leaf-cutter ants. Pantoea sp. has the capacity to degrade cellulose, and thus may play a role as cellulose-degrading symbionts in the gardens of leaf-cutter ants. The symbiosis between these bacteria and leaf-cutter ants is further supported by previous work, which showed they can be consistently isolated from fungus gardens across the diversity and geography of leaf-cutter ants. Indeed, these bacteria appear to be responsible for a significant amount of the nitrogen that is fixed in leaf-cutter fungus gardens; nitrogen that has been shown to be integrated into the ants. (Adapted from: http://www.ncbi.nlm.nih.gov/genomeprj/33803 and 20885794). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. At-9b
StrainAt-9b

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea sp. At-9b
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pantoea sp. At-9b

Accession NumberNC_014842.1

Gene Summary

Adenine Count

26641 bp

Thymine Count

26235 bp

Guanine Count

32406 bp

Cytosine Count

31595 bp

Genome Length

116877 bp

Protein-coding Genes

118 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
efflux transporter outer membrane subunitPAT9B_RS25935Not Available+28627 - 3012354732.4
carbonic anhydrasePAT9B_RS25940Not Available-30146 - 3088626470.0
c-type cytochromePAT9B_RS25950Not Available-31722 - 3311049890.9
gmc family oxidoreductasePAT9B_RS25955Not Available-33107 - 3471159326.3
sugar dehydrogenase complex small subunitPAT9B_RS25960Not Available-34723 - 3525919567.0
lysr substrate-binding domain-containing proteinPAT9B_RS25965Not Available+35562 - 3646133458.6
nuclear transport factor 2 family proteinPAT9B_RS25970Not Available+36976 - 3738014931.9
putative quinol monooxygenasePAT9B_RS25975Not Available+37458 - 3785014581.0
methionine synthasePAT9B_RS25980Not Available-37923 - 3907142366.3
flavin reductase family proteinPAT9B_RS25985Not Available+39282 - 3985421421.4

Displaying genes 831 – 840 of 5963 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites