Pantoea sp. At-9b

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. (strain At-9b) is a cellulose-degrading Gram-negative bacterium isolated from the fungus gardens of Atta cephalotes leaf-cutter ants. Pantoea sp. has the capacity to degrade cellulose, and thus may play a role as cellulose-degrading symbionts in the gardens of leaf-cutter ants. The symbiosis between these bacteria and leaf-cutter ants is further supported by previous work, which showed they can be consistently isolated from fungus gardens across the diversity and geography of leaf-cutter ants. Indeed, these bacteria appear to be responsible for a significant amount of the nitrogen that is fixed in leaf-cutter fungus gardens; nitrogen that has been shown to be integrated into the ants. (Adapted from: http://www.ncbi.nlm.nih.gov/genomeprj/33803 and 20885794). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. At-9b
StrainAt-9b

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea sp. At-9b
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pantoea sp. At-9b

Accession NumberNC_014842.1

Gene Summary

Adenine Count

26641 bp

Thymine Count

26235 bp

Guanine Count

32406 bp

Cytosine Count

31595 bp

Genome Length

116877 bp

Protein-coding Genes

118 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2- deoxyphosphogluconate aldolasePAT9B_RS18765Not Available+4056788 - 405870170868.5
murr/rpir family transcriptional regulatorPAT9B_RS18770Not Available+4059253 - 406009531221.4
lysr substrate-binding domain-containing proteinPAT9B_RS18775Not Available+4060203 - 406111734389.5
cbu_0592 family membrane proteinPAT9B_RS18780Not Available-4061241 - 406152210383.0
abc transporter substrate-binding proteinPAT9B_RS18785Not Available+4061717 - 406330658541.4
abc transporter permeasePAT9B_RS18790Not Available+4063306 - 406425334131.9
abc transporter permeasePAT9B_RS18795Not Available+4064257 - 406508729652.2
abc transporter atp-binding proteinPAT9B_RS18800Not Available+4065084 - 406670658618.3
coce/nond family hydrolasePAT9B_RS18805Not Available+4066703 - 406872475537.2
5-deoxy-glucuronate isomerasePAT9B_RS18810Not Available-4068774 - 406958930575.7

Displaying genes 5671 – 5680 of 5963 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites