Pantoea sp. At-9b

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. (strain At-9b) is a cellulose-degrading Gram-negative bacterium isolated from the fungus gardens of Atta cephalotes leaf-cutter ants. Pantoea sp. has the capacity to degrade cellulose, and thus may play a role as cellulose-degrading symbionts in the gardens of leaf-cutter ants. The symbiosis between these bacteria and leaf-cutter ants is further supported by previous work, which showed they can be consistently isolated from fungus gardens across the diversity and geography of leaf-cutter ants. Indeed, these bacteria appear to be responsible for a significant amount of the nitrogen that is fixed in leaf-cutter fungus gardens; nitrogen that has been shown to be integrated into the ants. (Adapted from: http://www.ncbi.nlm.nih.gov/genomeprj/33803 and 20885794). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. At-9b
StrainAt-9b

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea sp. At-9b
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pantoea sp. At-9b

Accession NumberNC_014842.1

Gene Summary

Adenine Count

26641 bp

Thymine Count

26235 bp

Guanine Count

32406 bp

Cytosine Count

31595 bp

Genome Length

116877 bp

Protein-coding Genes

118 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
gamma carbonic anhydrase family proteinPAT9B_RS18170Not Available+3953565 - 395411919774.8
duf1488 domain-containing proteinPAT9B_RS18175Not Available-3954095 - 39543439317.76
shikimate dehydrogenasePAT9B_RS18180Not Available-3954340 - 395515829152.2
l-threonylcarbamoyladenylate synthase type 1 tsacPAT9B_RS18185Not Available-3955162 - 395573720721.8
type i dna topoisomerasePAT9B_RS18190Not Available-3955743 - 395628819992.1
duf494 family protein smgPAT9B_RS18195Not Available-3956313 - 395678618540.2
dna-protecting protein dpraPAT9B_RS18200Not Available-3956758 - 395788241020.4
peptide deformylasePAT9B_RS18205Not Available+3958000 - 395851219286.2
methionyl-trna formyltransferasePAT9B_RS18210Not Available+3958534 - 395947834118.3
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbPAT9B_RS18215Not Available+3959527 - 396081347817.7

Displaying genes 5551 – 5560 of 5963 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites