Pantoea sp. At-9b

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. (strain At-9b) is a cellulose-degrading Gram-negative bacterium isolated from the fungus gardens of Atta cephalotes leaf-cutter ants. Pantoea sp. has the capacity to degrade cellulose, and thus may play a role as cellulose-degrading symbionts in the gardens of leaf-cutter ants. The symbiosis between these bacteria and leaf-cutter ants is further supported by previous work, which showed they can be consistently isolated from fungus gardens across the diversity and geography of leaf-cutter ants. Indeed, these bacteria appear to be responsible for a significant amount of the nitrogen that is fixed in leaf-cutter fungus gardens; nitrogen that has been shown to be integrated into the ants. (Adapted from: http://www.ncbi.nlm.nih.gov/genomeprj/33803 and 20885794). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. At-9b
StrainAt-9b

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea sp. At-9b
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pantoea sp. At-9b

Accession NumberNC_014842.1

Gene Summary

Adenine Count

26641 bp

Thymine Count

26235 bp

Guanine Count

32406 bp

Cytosine Count

31595 bp

Genome Length

116877 bp

Protein-coding Genes

118 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dna mismatch repair endonuclease mutlPAT9B_RS17920Not Available-3899786 - 390162767701.3
n-acetylmuramoyl-l-alanine amidase amibPAT9B_RS17925Not Available-3901671 - 390332059210.8
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaePAT9B_RS17930Not Available-3903317 - 390379317503.8
bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerasePAT9B_RS17935Not Available-3903797 - 390531452898.8
trna epoxyqueuosine(34) reductase quegPAT9B_RS17940Not Available+3905313 - 390645243293.6
Trna-glyNot AvailableNot Available+3906878 - 3906953Not Available
Trna-glyNot AvailableNot Available+3906979 - 3907054Not Available
Trna-glyNot AvailableNot Available+3907081 - 3907156Not Available
oligoribonucleasePAT9B_RS17960Not Available-3907319 - 390786720850.7
small ribosomal subunit biogenesis gtpase rsgaPAT9B_RS17965Not Available+3907970 - 390901938736.8

Displaying genes 5501 – 5510 of 5963 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites