Pantoea sp. At-9b

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. (strain At-9b) is a cellulose-degrading Gram-negative bacterium isolated from the fungus gardens of Atta cephalotes leaf-cutter ants. Pantoea sp. has the capacity to degrade cellulose, and thus may play a role as cellulose-degrading symbionts in the gardens of leaf-cutter ants. The symbiosis between these bacteria and leaf-cutter ants is further supported by previous work, which showed they can be consistently isolated from fungus gardens across the diversity and geography of leaf-cutter ants. Indeed, these bacteria appear to be responsible for a significant amount of the nitrogen that is fixed in leaf-cutter fungus gardens; nitrogen that has been shown to be integrated into the ants. (Adapted from: http://www.ncbi.nlm.nih.gov/genomeprj/33803 and 20885794). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. At-9b
StrainAt-9b

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea sp. At-9b
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pantoea sp. At-9b

Accession NumberNC_014842.1

Gene Summary

Adenine Count

26641 bp

Thymine Count

26235 bp

Guanine Count

32406 bp

Cytosine Count

31595 bp

Genome Length

116877 bp

Protein-coding Genes

118 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
pirin family proteinPAT9B_RS17670Not Available-3849125 - 384982625621.6
lysr family transcriptional regulatorPAT9B_RS17675Not Available+3849956 - 385085533509.6
bglg family transcription antiterminatorPAT9B_RS17680Not Available-3850990 - 385290072712.4
2-dehydro-3-deoxy-phosphogluconate aldolasePAT9B_RS17685Not Available-3852924 - 385366125892.1
dgae family pyridoxal phosphate-dependent ammonia lyasePAT9B_RS17690Not Available-3853658 - 385477939903.8
amidohydrolase/deacetylase family metallohydrolasePAT9B_RS17695Not Available-3854763 - 385589640577.6
duf4310 family proteinPAT9B_RS17700Not Available-3855906 - 385654721877.2
duf4311 domain-containing proteinPAT9B_RS17705Not Available-3856560 - 385733627166.9
duf4312 family proteinPAT9B_RS17710Not Available-3857364 - 385766311432.8
sfcgs family glycine-rich proteinPAT9B_RS17715Not Available-3857666 - 385802812457.1

Displaying genes 5451 – 5460 of 5963 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites