Pantoea sp. At-9b

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. (strain At-9b) is a cellulose-degrading Gram-negative bacterium isolated from the fungus gardens of Atta cephalotes leaf-cutter ants. Pantoea sp. has the capacity to degrade cellulose, and thus may play a role as cellulose-degrading symbionts in the gardens of leaf-cutter ants. The symbiosis between these bacteria and leaf-cutter ants is further supported by previous work, which showed they can be consistently isolated from fungus gardens across the diversity and geography of leaf-cutter ants. Indeed, these bacteria appear to be responsible for a significant amount of the nitrogen that is fixed in leaf-cutter fungus gardens; nitrogen that has been shown to be integrated into the ants. (Adapted from: http://www.ncbi.nlm.nih.gov/genomeprj/33803 and 20885794). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. At-9b
StrainAt-9b

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea sp. At-9b
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pantoea sp. At-9b

Accession NumberNC_014842.1

Gene Summary

Adenine Count

26641 bp

Thymine Count

26235 bp

Guanine Count

32406 bp

Cytosine Count

31595 bp

Genome Length

116877 bp

Protein-coding Genes

118 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
sdr family oxidoreductasePAT9B_RS16535Not Available+3610153 - 361100729166.6
lysr family transcriptional regulatorPAT9B_RS16540Not Available-3611264 - 361213032199.9
lactoylglutathione lyase family proteinPAT9B_RS16545Not Available+3612225 - 361272518781.3
alcohol dehydrogenase catalytic domain-containing proteinPAT9B_RS16550Not Available+3612718 - 361366834027.6
nadh:flavin oxidoreductase/nadh oxidasePAT9B_RS16555Not Available+3613687 - 361479040517.8
alpha,alpha-trehalase trefPAT9B_RS16560Not Available+3615166 - 361682463881.4
alpha/beta fold hydrolasePAT9B_RS16565Not Available-3616926 - 361774730065.6
mfs transporterPAT9B_RS16570Not Available+3617966 - 361955556771.0
lysr family transcriptional regulatorPAT9B_RS16575Not Available-3619558 - 362046633899.5
antibiotic biosynthesis monooxygenasePAT9B_RS16580Not Available+3620589 - 362114921196.9

Displaying genes 5261 – 5270 of 5963 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites