Pantoea sp. At-9b

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. (strain At-9b) is a cellulose-degrading Gram-negative bacterium isolated from the fungus gardens of Atta cephalotes leaf-cutter ants. Pantoea sp. has the capacity to degrade cellulose, and thus may play a role as cellulose-degrading symbionts in the gardens of leaf-cutter ants. The symbiosis between these bacteria and leaf-cutter ants is further supported by previous work, which showed they can be consistently isolated from fungus gardens across the diversity and geography of leaf-cutter ants. Indeed, these bacteria appear to be responsible for a significant amount of the nitrogen that is fixed in leaf-cutter fungus gardens; nitrogen that has been shown to be integrated into the ants. (Adapted from: http://www.ncbi.nlm.nih.gov/genomeprj/33803 and 20885794). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. At-9b
StrainAt-9b

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea sp. At-9b
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pantoea sp. At-9b

Accession NumberNC_014842.1

Gene Summary

Adenine Count

26641 bp

Thymine Count

26235 bp

Guanine Count

32406 bp

Cytosine Count

31595 bp

Genome Length

116877 bp

Protein-coding Genes

118 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
manganese/iron abc transporter atp-binding proteinPAT9B_RS16490Not Available+3601883 - 360270429550.8
iron/manganese abc transporter permease subunit sitcPAT9B_RS16495Not Available+3602707 - 360357931205.9
metal abc transporter permeasePAT9B_RS16500Not Available+3603560 - 360440230064.4
hypothetical proteinPAT9B_RS16505Not Available-3604399 - 36046087349.78
helix-turn-helix domain-containing proteinPAT9B_RS16510Not Available-3604786 - 360565233056.5
duf2474 domain-containing proteinPAT9B_RS29740Not Available-3605904 - 36060505305.84
cytochrome d ubiquinol oxidase subunit iiPAT9B_RS16515Not Available-3606052 - 360705636946.2
cytochrome ubiquinol oxidase subunit iPAT9B_RS16520Not Available-3607053 - 360846852168.1
yghx family hydrolasePAT9B_RS16525Not Available+3608697 - 360958732292.4
winged helix-turn-helix transcriptional regulatorPAT9B_RS16530Not Available-3609680 - 361005114323.3

Displaying genes 5251 – 5260 of 5963 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites