Pantoea sp. At-9b

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. (strain At-9b) is a cellulose-degrading Gram-negative bacterium isolated from the fungus gardens of Atta cephalotes leaf-cutter ants. Pantoea sp. has the capacity to degrade cellulose, and thus may play a role as cellulose-degrading symbionts in the gardens of leaf-cutter ants. The symbiosis between these bacteria and leaf-cutter ants is further supported by previous work, which showed they can be consistently isolated from fungus gardens across the diversity and geography of leaf-cutter ants. Indeed, these bacteria appear to be responsible for a significant amount of the nitrogen that is fixed in leaf-cutter fungus gardens; nitrogen that has been shown to be integrated into the ants. (Adapted from: http://www.ncbi.nlm.nih.gov/genomeprj/33803 and 20885794). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. At-9b
StrainAt-9b

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea sp. At-9b
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pantoea sp. At-9b

Accession NumberNC_014842.1

Gene Summary

Adenine Count

26641 bp

Thymine Count

26235 bp

Guanine Count

32406 bp

Cytosine Count

31595 bp

Genome Length

116877 bp

Protein-coding Genes

118 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
selt/selw/selh family proteinPAT9B_RS16440Not Available+3593709 - 359399610761.8
lysr family transcriptional regulatorPAT9B_RS16445Not Available-3594038 - 359491333062.4
duf554 domain-containing proteinPAT9B_RS16450Not Available-3594983 - 359570524956.8
ubix family flavin prenyltransferasePAT9B_RS16455Not Available-3595716 - 359629421190.8
ubid family decarboxylasePAT9B_RS16460Not Available-3596306 - 359778754039.8
padr family transcriptional regulatorPAT9B_RS16465Not Available-3597984 - 359852320064.9
siderophore-interacting proteinPAT9B_RS16470Not Available-3598616 - 359940428922.1
sdr family nad(p)-dependent oxidoreductasePAT9B_RS16475Not Available-3599425 - 360015025375.5
glcg/hbps family heme-binding proteinPAT9B_RS16480Not Available-3600161 - 360060414838.6
metal abc transporter substrate-binding proteinPAT9B_RS16485Not Available+3600978 - 360188033146.8

Displaying genes 5241 – 5250 of 5963 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites