Pantoea sp. At-9b

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. (strain At-9b) is a cellulose-degrading Gram-negative bacterium isolated from the fungus gardens of Atta cephalotes leaf-cutter ants. Pantoea sp. has the capacity to degrade cellulose, and thus may play a role as cellulose-degrading symbionts in the gardens of leaf-cutter ants. The symbiosis between these bacteria and leaf-cutter ants is further supported by previous work, which showed they can be consistently isolated from fungus gardens across the diversity and geography of leaf-cutter ants. Indeed, these bacteria appear to be responsible for a significant amount of the nitrogen that is fixed in leaf-cutter fungus gardens; nitrogen that has been shown to be integrated into the ants. (Adapted from: http://www.ncbi.nlm.nih.gov/genomeprj/33803 and 20885794). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. At-9b
StrainAt-9b

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea sp. At-9b
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pantoea sp. At-9b

Accession NumberNC_014842.1

Gene Summary

Adenine Count

26641 bp

Thymine Count

26235 bp

Guanine Count

32406 bp

Cytosine Count

31595 bp

Genome Length

116877 bp

Protein-coding Genes

118 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
trna (guanosine(46)-n7)-methyltransferase trmbPAT9B_RS16340Not Available-3571291 - 357201027316.2
a/g-specific adenine glycosylasePAT9B_RS16345Not Available+3572166 - 357325140876.2
oxidative damage protection proteinPAT9B_RS16350Not Available+3573251 - 357352310736.9
membrane-bound lytic murein transglycosylase mltcPAT9B_RS16355Not Available+3573575 - 357465439990.6
ornithine decarboxylasePAT9B_RS16360Not Available-3574818 - 357696579283.7
nad(p)/fad-dependent oxidoreductasePAT9B_RS16365Not Available-3577459 - 357878748439.5
sdr family nad(p)-dependent oxidoreductasePAT9B_RS16370Not Available-3578816 - 357952025020.1
iclr family transcriptional regulatorPAT9B_RS16375Not Available-3579614 - 358041428690.9
transporter substrate-binding domain-containing proteinPAT9B_RS16380Not Available+3580606 - 358143030234.6
amino acid abc transporter permeasePAT9B_RS16385Not Available+3581448 - 358215826205.5

Displaying genes 5221 – 5230 of 5963 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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