Pantoea sp. At-9b

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. (strain At-9b) is a cellulose-degrading Gram-negative bacterium isolated from the fungus gardens of Atta cephalotes leaf-cutter ants. Pantoea sp. has the capacity to degrade cellulose, and thus may play a role as cellulose-degrading symbionts in the gardens of leaf-cutter ants. The symbiosis between these bacteria and leaf-cutter ants is further supported by previous work, which showed they can be consistently isolated from fungus gardens across the diversity and geography of leaf-cutter ants. Indeed, these bacteria appear to be responsible for a significant amount of the nitrogen that is fixed in leaf-cutter fungus gardens; nitrogen that has been shown to be integrated into the ants. (Adapted from: http://www.ncbi.nlm.nih.gov/genomeprj/33803 and 20885794). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. At-9b
StrainAt-9b

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea sp. At-9b
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pantoea sp. At-9b

Accession NumberNC_014842.1

Gene Summary

Adenine Count

26641 bp

Thymine Count

26235 bp

Guanine Count

32406 bp

Cytosine Count

31595 bp

Genome Length

116877 bp

Protein-coding Genes

118 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
yggt family proteinPAT9B_RS16290Not Available+3562174 - 356272820857.9
xtp/ditp diphosphatasePAT9B_RS16295Not Available+3562749 - 356334220777.7
radical sam family heme chaperone hemwPAT9B_RS16300Not Available+3563335 - 356447442656.9
gntr family transcriptional regulatorPAT9B_RS16305Not Available-3564516 - 356525027684.6
transketolasePAT9B_RS16310Not Available+3565763 - 356775773162.8
pts sugar transporter subunit iiaPAT9B_RS16315Not Available+3567791 - 356825217012.3
pts sugar transporter subunit iibPAT9B_RS16320Not Available+3568288 - 35685609978.31
pts ascorbate transporter subunit iicPAT9B_RS16325Not Available+3568647 - 357002348640.0
duf2884 domain-containing proteinPAT9B_RS16330Not Available-3570116 - 357083226313.1
yggl family proteinPAT9B_RS16335Not Available-3570965 - 357129112608.7

Displaying genes 5211 – 5220 of 5963 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites