Pantoea sp. At-9b

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. (strain At-9b) is a cellulose-degrading Gram-negative bacterium isolated from the fungus gardens of Atta cephalotes leaf-cutter ants. Pantoea sp. has the capacity to degrade cellulose, and thus may play a role as cellulose-degrading symbionts in the gardens of leaf-cutter ants. The symbiosis between these bacteria and leaf-cutter ants is further supported by previous work, which showed they can be consistently isolated from fungus gardens across the diversity and geography of leaf-cutter ants. Indeed, these bacteria appear to be responsible for a significant amount of the nitrogen that is fixed in leaf-cutter fungus gardens; nitrogen that has been shown to be integrated into the ants. (Adapted from: http://www.ncbi.nlm.nih.gov/genomeprj/33803 and 20885794). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. At-9b
StrainAt-9b

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea sp. At-9b
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pantoea sp. At-9b

Accession NumberNC_014842.1

Gene Summary

Adenine Count

26641 bp

Thymine Count

26235 bp

Guanine Count

32406 bp

Cytosine Count

31595 bp

Genome Length

116877 bp

Protein-coding Genes

118 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
amino acid abc transporter permeasePAT9B_RS15995Not Available-3484865 - 348551523570.9
urea carboxylase-associated family proteinPAT9B_RS16000Not Available-3485519 - 348616623286.4
duf1989 domain-containing proteinPAT9B_RS16005Not Available-3486150 - 348678222991.0
transporter substrate-binding domain-containing proteinPAT9B_RS16010Not Available-3486785 - 348762129807.7
murr/rpir family transcriptional regulatorPAT9B_RS16015Not Available-3487863 - 348871431240.4
lysine--trna ligasePAT9B_RS16020Not Available-3488958 - 349047557625.5
peptide chain release factor 2PAT9B_RS16025Not Available-3490485 - 349158341240.1
single-stranded-dna-specific exonuclease recjPAT9B_RS16030Not Available-3491804 - 349353463345.1
bifunctional protein-disulfide isomerase/oxidoreductase dsbcPAT9B_RS16035Not Available-3493541 - 349425425935.6
site-specific tyrosine recombinase xerdPAT9B_RS16040Not Available-3494277 - 349517034180.3

Displaying genes 5151 – 5160 of 5963 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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