Pantoea sp. At-9b

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. (strain At-9b) is a cellulose-degrading Gram-negative bacterium isolated from the fungus gardens of Atta cephalotes leaf-cutter ants. Pantoea sp. has the capacity to degrade cellulose, and thus may play a role as cellulose-degrading symbionts in the gardens of leaf-cutter ants. The symbiosis between these bacteria and leaf-cutter ants is further supported by previous work, which showed they can be consistently isolated from fungus gardens across the diversity and geography of leaf-cutter ants. Indeed, these bacteria appear to be responsible for a significant amount of the nitrogen that is fixed in leaf-cutter fungus gardens; nitrogen that has been shown to be integrated into the ants. (Adapted from: http://www.ncbi.nlm.nih.gov/genomeprj/33803 and 20885794). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. At-9b
StrainAt-9b

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea sp. At-9b
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pantoea sp. At-9b

Accession NumberNC_014842.1

Gene Summary

Adenine Count

26641 bp

Thymine Count

26235 bp

Guanine Count

32406 bp

Cytosine Count

31595 bp

Genome Length

116877 bp

Protein-coding Genes

118 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
efflux transporter outer membrane subunitPAT9B_RS15895Not Available-3460234 - 346164050806.5
efflux rnd transporter permease subunitPAT9B_RS15900Not Available-3461630 - 3464764113230.0
efflux rnd transporter periplasmic adaptor subunitPAT9B_RS15905Not Available-3464774 - 346591040168.6
hypothetical proteinPAT9B_RS15910Not Available-3466199 - 34663877263.76
penicillin-binding transpeptidase domain-containing proteinPAT9B_RS15915Not Available-3466812 - 346854262583.5
molybdopterin-dependent oxidoreductasePAT9B_RS15920Not Available-3468814 - 347108783746.5
hth-type transcriptional regulator galrPAT9B_RS15925Not Available+3471282 - 347228336345.7
methyl-accepting chemotaxis proteinPAT9B_RS15930Not Available+3472449 - 347397254630.6
gnat family n-acetyltransferasePAT9B_RS15935Not Available-3473958 - 347441617665.8
fcd domain-containing proteinPAT9B_RS15940Not Available-3474416 - 347518929563.1

Displaying genes 5131 – 5140 of 5963 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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