Pantoea sp. At-9b

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. (strain At-9b) is a cellulose-degrading Gram-negative bacterium isolated from the fungus gardens of Atta cephalotes leaf-cutter ants. Pantoea sp. has the capacity to degrade cellulose, and thus may play a role as cellulose-degrading symbionts in the gardens of leaf-cutter ants. The symbiosis between these bacteria and leaf-cutter ants is further supported by previous work, which showed they can be consistently isolated from fungus gardens across the diversity and geography of leaf-cutter ants. Indeed, these bacteria appear to be responsible for a significant amount of the nitrogen that is fixed in leaf-cutter fungus gardens; nitrogen that has been shown to be integrated into the ants. (Adapted from: http://www.ncbi.nlm.nih.gov/genomeprj/33803 and 20885794). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. At-9b
StrainAt-9b

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea sp. At-9b
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pantoea sp. At-9b

Accession NumberNC_014842.1

Gene Summary

Adenine Count

26641 bp

Thymine Count

26235 bp

Guanine Count

32406 bp

Cytosine Count

31595 bp

Genome Length

116877 bp

Protein-coding Genes

118 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dihydrodipicolinate synthase family proteinPAT9B_RS15495Not Available+3363894 - 336478132479.0
zinc ribbon domain-containing protein yjdmPAT9B_RS15500Not Available-3364815 - 336515312017.3
lytic murein transglycosylase bPAT9B_RS15505Not Available-3365240 - 336632239543.0
dna mismatch repair protein mutsPAT9B_RS15510Not Available+3366685 - 336922894284.7
rna polymerase sigma factor rposPAT9B_RS15515Not Available-3369299 - 337029137956.1
murein hydrolase activator nlpdPAT9B_RS15520Not Available-3370342 - 337143037438.8
protein-l-isoaspartate(d-aspartate) o-methyltransferasePAT9B_RS15525Not Available-3371592 - 337221823241.1
5'/3'-nucleotidase surePAT9B_RS15530Not Available-3372212 - 337297326923.1
trna pseudouridine(13) synthase trudPAT9B_RS15535Not Available-3372954 - 337399739218.8
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthasePAT9B_RS15540Not Available-3373994 - 337447616981.5

Displaying genes 5051 – 5060 of 5963 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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