Pantoea sp. At-9b

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. (strain At-9b) is a cellulose-degrading Gram-negative bacterium isolated from the fungus gardens of Atta cephalotes leaf-cutter ants. Pantoea sp. has the capacity to degrade cellulose, and thus may play a role as cellulose-degrading symbionts in the gardens of leaf-cutter ants. The symbiosis between these bacteria and leaf-cutter ants is further supported by previous work, which showed they can be consistently isolated from fungus gardens across the diversity and geography of leaf-cutter ants. Indeed, these bacteria appear to be responsible for a significant amount of the nitrogen that is fixed in leaf-cutter fungus gardens; nitrogen that has been shown to be integrated into the ants. (Adapted from: http://www.ncbi.nlm.nih.gov/genomeprj/33803 and 20885794). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. At-9b
StrainAt-9b

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea sp. At-9b
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pantoea sp. At-9b

Accession NumberNC_014842.1

Gene Summary

Adenine Count

26641 bp

Thymine Count

26235 bp

Guanine Count

32406 bp

Cytosine Count

31595 bp

Genome Length

116877 bp

Protein-coding Genes

118 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
23s rrna pseudouridine(1911/1915/1917) synthase rludPAT9B_RS15350Not Available-3340179 - 334115936889.5
outer membrane protein assembly factor bamdPAT9B_RS15355Not Available+3341290 - 334202127238.5
ribosome-associated translation inhibitor raiaPAT9B_RS15360Not Available+3342290 - 334261612125.6
hypothetical proteinPAT9B_RS30965Not Available+3342716 - 33428745967.19
bifunctional chorismate mutase/prephenate dehydratasePAT9B_RS15365Not Available+3342861 - 334402443240.0
bifunctional chorismate mutase/prephenate dehydrogenasePAT9B_RS15370Not Available-3344058 - 334517942160.1
3-deoxy-7-phosphoheptulonate synthasePAT9B_RS15375Not Available-3345186 - 334626539255.0
gnat family n-acetyltransferasePAT9B_RS15380Not Available+3346566 - 334708719510.1
50s ribosomal protein l19PAT9B_RS15385Not Available-3347155 - 334750213148.0
trna (guanosine(37)-n1)-methyltransferase trmdPAT9B_RS15390Not Available-3347545 - 334830928522.9

Displaying genes 5021 – 5030 of 5963 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites