Pantoea sp. At-9b

Gram-negativeBacilliNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea sp. (strain At-9b) is a cellulose-degrading Gram-negative bacterium isolated from the fungus gardens of Atta cephalotes leaf-cutter ants. Pantoea sp. has the capacity to degrade cellulose, and thus may play a role as cellulose-degrading symbionts in the gardens of leaf-cutter ants. The symbiosis between these bacteria and leaf-cutter ants is further supported by previous work, which showed they can be consistently isolated from fungus gardens across the diversity and geography of leaf-cutter ants. Indeed, these bacteria appear to be responsible for a significant amount of the nitrogen that is fixed in leaf-cutter fungus gardens; nitrogen that has been shown to be integrated into the ants. (Adapted from: http://www.ncbi.nlm.nih.gov/genomeprj/33803 and 20885794). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea sp. At-9b
StrainAt-9b

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Pantoea sp. At-9b
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Pantoea sp. At-9b

Accession NumberNC_014842.1

Gene Summary

Adenine Count

26641 bp

Thymine Count

26235 bp

Guanine Count

32406 bp

Cytosine Count

31595 bp

Genome Length

116877 bp

Protein-coding Genes

118 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
amino acid abc transporter permeasePAT9B_RS24880Not Available+204816 - 20547223696.9
amino acid abc transporter atp-binding proteinPAT9B_RS24885Not Available+205453 - 20618126060.9
transporter substrate-binding domain-containing proteinPAT9B_RS24890Not Available+206200 - 20698528099.8
succinylglutamate desuccinylase/aspartoacylase family proteinPAT9B_RS24895Not Available+206988 - 20798035002.6
threonine/serine dehydratasePAT9B_RS24900Not Available+207980 - 20892133509.3
helix-turn-helix domain-containing proteinPAT9B_RS24905Not Available+209094 - 20940811775.6
type ii toxin-antitoxin system hipa family toxinPAT9B_RS24910Not Available+209405 - 21066746308.5
gnat family n-acetyltransferasePAT9B_RS24915Not Available+210667 - 21120620519.3
sdr family nad(p)-dependent oxidoreductasePAT9B_RS24920Not Available-211207 - 21184523028.6
transposasePAT9B_RS24925Not Available+212107 - 21323741019.2

Displaying genes 321 – 330 of 5963 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites