Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Roseburia |
| Species | Roseburia hominis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Roseburia hominis A2-183
Accession NumberNC_015977.1
Gene Summary
Adenine Count
918915 bp
Thymine Count
931143 bp
Guanine Count
859982 bp
Cytosine Count
882085 bp
Genome Length
3592125 bp
Protein-coding Genes
3277 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | RHOM_RS17560 | Not Available | + | 479332 - 481083 | 67026.2 |
| ribosome hibernation-promoting factor, hpf/yfia family | RHOM_RS02130 | Not Available | + | 481202 - 481732 | 20369.4 |
| hypothetical protein | RHOM_RS02135 | Not Available | + | 481968 - 482285 | 12343.0 |
| d-alanine--d-alanine ligase | RHOM_RS02140 | Not Available | + | 482410 - 483465 | 38672.3 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | RHOM_RS02145 | Not Available | + | 483492 - 484910 | 51565.3 |
| shikimate kinase | RHOM_RS02150 | Not Available | + | 484926 - 485432 | 18900.2 |
| m23 family metallopeptidase | RHOM_RS02155 | Not Available | + | 485429 - 486985 | 56774.6 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | RHOM_RS02160 | Not Available | + | 487156 - 488448 | 46342.1 |
| duf6198 family protein | RHOM_RS02165 | Not Available | + | 488620 - 489309 | 25028.5 |
| is110 family transposase | RHOM_RS02175 | Not Available | - | 489610 - 490830 | 46540.7 |
Pathways
1 pathway
Catabolism of salicylate esters (SalDE Operon activation)
Catabolism of salicylate esters (SalDE Operon activation)
