Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | HDEN_RS04460 | Not Available | - | 942762 - 943436 | 24068.1 |
| Trna-tyr | Not Available | Not Available | + | 943845 - 943929 | Not Available |
| tyrosine-type recombinase/integrase | HDEN_RS04470 | Not Available | + | 944079 - 945335 | 46910.8 |
| helicase-related protein | HDEN_RS04475 | Not Available | - | 945499 - 948879 | 125887.0 |
| hnh endonuclease | HDEN_RS04480 | Not Available | - | 948888 - 950483 | 59676.3 |
| eco57i restriction-modification methylase domain-containing protein | HDEN_RS04485 | Not Available | - | 950505 - 954524 | 148260.0 |
| recombinase family protein | HDEN_RS04490 | Not Available | - | 955068 - 955535 | 17044.5 |
| porin | HDEN_RS04500 | Not Available | + | 957064 - 958590 | 53497.8 |
| hypothetical protein | HDEN_RS04505 | Not Available | + | 958979 - 959263 | 10511.1 |
| hypothetical protein | HDEN_RS04510 | Not Available | + | 959288 - 959575 | 10514.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
