Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HDEN_RS03235 | Not Available | - | 690306 - 691160 | 32881.6 |
| duf6602 domain-containing protein | HDEN_RS03240 | Not Available | - | 691204 - 691926 | 25992.8 |
| nucleotidyltransferase domain-containing protein | HDEN_RS03245 | Not Available | - | 691923 - 692675 | 27490.3 |
| tyrosine-type recombinase/integrase | HDEN_RS03250 | Not Available | - | 692851 - 694098 | 45747.1 |
| polyphosphate kinase 2 | HDEN_RS03255 | Not Available | + | 694546 - 695640 | 41737.4 |
| large conductance mechanosensitive channel protein mscl | HDEN_RS03260 | Not Available | - | 695727 - 696143 | 14810.5 |
| threonine-phosphate decarboxylase cobd | HDEN_RS03265 | Not Available | + | 696452 - 697498 | 38125.0 |
| tonb-dependent receptor family protein | HDEN_RS03270 | Not Available | + | 697773 - 700151 | 84657.6 |
| abc transporter substrate-binding protein | HDEN_RS03275 | Not Available | + | 700214 - 701185 | 33871.3 |
| abc transporter permease | HDEN_RS03280 | Not Available | + | 701192 - 702004 | 28867.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
