Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | HDEN_RS04515 | Not Available | - | 959572 - 960228 | 24129.1 |
| atp-binding protein | HDEN_RS04520 | Not Available | - | 960225 - 961823 | 57596.8 |
| efflux rnd transporter permease subunit | HDEN_RS04525 | Not Available | + | 962202 - 965396 | 114976.0 |
| efflux rnd transporter periplasmic adaptor subunit | HDEN_RS04530 | Not Available | + | 965389 - 966705 | 47078.6 |
| efflux transporter outer membrane subunit | HDEN_RS04535 | Not Available | + | 966705 - 968237 | 54889.8 |
| tetratricopeptide repeat protein | HDEN_RS04540 | Not Available | - | 968280 - 968921 | 23143.9 |
| voc family protein | HDEN_RS04545 | Not Available | - | 969822 - 970181 | 13110.7 |
| porin | HDEN_RS04550 | Not Available | - | 970718 - 972037 | 46881.5 |
| nitrate/nitrite transporter | HDEN_RS04555 | Not Available | + | 972589 - 975330 | 98722.4 |
| nitrate reductase subunit alpha | HDEN_RS04560 | Not Available | + | 975346 - 979089 | 139090.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
