Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-oxo acid dehydrogenase subunit e2 | HDEN_RS04405 | Not Available | + | 933079 - 934371 | 45817.7 |
| dihydrolipoyl dehydrogenase | HDEN_RS04410 | Not Available | + | 934386 - 935831 | 50672.3 |
| hypothetical protein | HDEN_RS04415 | Not Available | + | 936953 - 937153 | 6982.19 |
| patatin-like phospholipase family protein | HDEN_RS04420 | Not Available | + | 937377 - 938333 | 34017.2 |
| rna polymerase sigma factor | HDEN_RS04425 | Not Available | - | 938977 - 940242 | 46342.7 |
| ycii family protein | HDEN_RS04430 | Not Available | - | 940246 - 940635 | 14467.4 |
| srpbcc family protein | HDEN_RS04435 | Not Available | + | 940862 - 941335 | 17310.6 |
| Trna-thr | Not Available | Not Available | + | 941475 - 941549 | Not Available |
| hypothetical protein | HDEN_RS04450 | Not Available | + | 941874 - 942215 | 13249.3 |
| hypothetical protein | HDEN_RS04455 | Not Available | + | 942392 - 942706 | 11130.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
