Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | HDEN_RS04200 | Not Available | + | 897571 - 898452 | 31180.0 |
| tetratricopeptide repeat protein | HDEN_RS04205 | Not Available | + | 898615 - 899409 | 27748.7 |
| pqq-binding-like beta-propeller repeat protein | HDEN_RS04210 | Not Available | + | 899440 - 900789 | 46265.1 |
| ribosome biogenesis gtpase der | HDEN_RS04215 | Not Available | + | 900876 - 902282 | 50476.9 |
| hypothetical protein | HDEN_RS04220 | Not Available | + | 902406 - 902666 | 9345.26 |
| dna polymerase iii subunit chi | HDEN_RS04225 | Not Available | + | 902849 - 903295 | 16501.1 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | HDEN_RS04230 | Not Available | + | 903345 - 904190 | 31032.4 |
| cold-shock protein | HDEN_RS04235 | Not Available | + | 904434 - 904649 | 7747.17 |
| hypothetical protein | HDEN_RS04240 | Not Available | + | 905010 - 905270 | 8809.84 |
| hypothetical protein | HDEN_RS04245 | Not Available | - | 905353 - 905640 | 9019.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
