Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methanol/ethanol family pqq-dependent dehydrogenase | HDEN_RS03895 | Not Available | - | 828569 - 830266 | 61455.4 |
| sdr family oxidoreductase | HDEN_RS03900 | Not Available | + | 830636 - 831349 | 24802.7 |
| efflux rnd transporter permease subunit | HDEN_RS03905 | Not Available | - | 831475 - 834660 | 113219.0 |
| efflux rnd transporter periplasmic adaptor subunit | HDEN_RS03910 | Not Available | - | 834669 - 835796 | 39849.5 |
| tetr/acrr family transcriptional regulator | HDEN_RS03915 | Not Available | + | 836164 - 836766 | 22500.2 |
| hypothetical protein | HDEN_RS03920 | Not Available | - | 836949 - 837194 | 8454.68 |
| patatin-like phospholipase family protein | HDEN_RS03925 | Not Available | - | 837510 - 838757 | 46942.4 |
| 3-hydroxybutyrate dehydrogenase | HDEN_RS03930 | Not Available | + | 838929 - 839756 | 28905.5 |
| acetoacetate decarboxylase | HDEN_RS03935 | Not Available | + | 839824 - 840573 | 27568.3 |
| duf3617 domain-containing protein | HDEN_RS03940 | Not Available | - | 840643 - 841056 | 14999.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
