Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamine amidotransferase | HDEN_RS03795 | Not Available | + | 806211 - 807110 | 31847.7 |
| protein glxc | HDEN_RS03800 | Not Available | + | 807110 - 807799 | 24250.8 |
| fmn-binding glutamate synthase family protein | HDEN_RS03805 | Not Available | + | 807799 - 809130 | 47501.9 |
| helix-turn-helix domain-containing protein | HDEN_RS03810 | Not Available | - | 809197 - 809853 | 24587.7 |
| apc family permease | HDEN_RS03815 | Not Available | + | 810096 - 811844 | 62776.1 |
| substrate-binding periplasmic protein | HDEN_RS03825 | Not Available | - | 812201 - 813067 | 31073.6 |
| c-type cytochrome | HDEN_RS03830 | Not Available | - | 812991 - 813407 | 14808.8 |
| pyrroloquinoline quinone-dependent dehydrogenase | HDEN_RS03835 | Not Available | - | 813483 - 815162 | 60480.9 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | HDEN_RS03840 | Not Available | + | 815527 - 816492 | 34044.3 |
| alpha-ketoacid dehydrogenase subunit beta | HDEN_RS03845 | Not Available | + | 816505 - 817521 | 36583.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
