Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfate abc transporter substrate-binding protein | HDEN_RS03685 | Not Available | + | 782537 - 783550 | 36477.0 |
| serine o-acetyltransferase epsc | HDEN_RS03690 | Not Available | + | 783609 - 784592 | 35031.6 |
| family 2a encapsulin nanocompartment shell protein | HDEN_RS03695 | Not Available | + | 784685 - 785596 | 33417.3 |
| family 2a encapsulin nanocompartment cargo protein cysteine desulfurase | HDEN_RS03700 | Not Available | + | 785583 - 787832 | 77817.4 |
| hypothetical protein | HDEN_RS03705 | Not Available | + | 788039 - 788326 | 10256.2 |
| porin | HDEN_RS03710 | Not Available | - | 788438 - 789817 | 48999.5 |
| chemotaxis protein cheb | HDEN_RS03715 | Not Available | - | 790295 - 791005 | 25410.8 |
| chemotaxis protein cheb | HDEN_RS03720 | Not Available | - | 791082 - 794180 | 115113.0 |
| crp/fnr family transcriptional regulator | HDEN_RS03725 | Not Available | - | 794245 - 794976 | 27015.8 |
| duf6894 family protein | HDEN_RS03730 | Not Available | + | 794975 - 795529 | 20629.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
