Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | HDEN_RS02995 | Not Available | + | 643456 - 645285 | 64712.4 |
| spor domain-containing protein | HDEN_RS03000 | Not Available | - | 645317 - 647068 | 61632.6 |
| atp-dependent clp protease adapter clps | HDEN_RS03005 | Not Available | + | 647736 - 648086 | 13132.8 |
| atp-dependent clp protease atp-binding subunit clpa | HDEN_RS03010 | Not Available | + | 648094 - 650544 | 90302.7 |
| nad(p)-dependent oxidoreductase | HDEN_RS03015 | Not Available | - | 650632 - 651273 | 22612.3 |
| hit family protein | HDEN_RS03020 | Not Available | - | 651349 - 651771 | 15094.2 |
| gnat family n-acetyltransferase | HDEN_RS03025 | Not Available | - | 651926 - 653098 | 43167.9 |
| glycerophosphodiester phosphodiesterase family protein | HDEN_RS03030 | Not Available | - | 653223 - 653972 | 27159.1 |
| rida family protein | HDEN_RS03035 | Not Available | - | 653976 - 654437 | 15912.2 |
| cell envelope integrity eipb family protein | HDEN_RS03040 | Not Available | + | 654569 - 655441 | 30974.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
