Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| host attachment family protein | HDEN_RS02895 | Not Available | - | 623555 - 624010 | 16320.6 |
| pas domain-containing sensor histidine kinase | HDEN_RS02900 | Not Available | + | 624206 - 626098 | 68853.7 |
| response regulator | HDEN_RS02905 | Not Available | - | 626150 - 626878 | 26938.1 |
| crp/fnr family transcriptional regulator | HDEN_RS02910 | Not Available | + | 627023 - 627715 | 24949.1 |
| pas domain-containing protein | HDEN_RS02915 | Not Available | - | 627791 - 628927 | 42546.4 |
| atp-binding protein | HDEN_RS02920 | Not Available | + | 629025 - 630716 | 62010.0 |
| two-component system response regulator narl | HDEN_RS02925 | Not Available | + | 630733 - 631404 | 24353.8 |
| heme anaerobic degradation radical sam methyltransferase chuw/hutw | HDEN_RS02930 | Not Available | + | 631719 - 633116 | 50575.3 |
| heme utilization cystosolic carrier protein hutx | HDEN_RS02935 | Not Available | + | 633113 - 633640 | 18706.5 |
| sdr family oxidoreductase | HDEN_RS02940 | Not Available | + | 633640 - 634329 | 24202.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
