Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase family protein | HDEN_RS02555 | Not Available | - | 547578 - 548393 | 29864.8 |
| peptide-methionine (r)-s-oxide reductase msrb | HDEN_RS02560 | Not Available | - | 548453 - 548899 | 16600.3 |
| duf2778 domain-containing protein | HDEN_RS02565 | Not Available | - | 549044 - 550177 | 40703.9 |
| zf-hc2 domain-containing protein | HDEN_RS02570 | Not Available | - | 550320 - 550529 | 7808.08 |
| sigma-70 family rna polymerase sigma factor | HDEN_RS02575 | Not Available | - | 550532 - 551122 | 22958.5 |
| catalase family peroxidase | HDEN_RS02580 | Not Available | + | 551292 - 552272 | 33714.2 |
| mfs transporter | HDEN_RS02585 | Not Available | + | 552588 - 553895 | 46511.5 |
| slbb domain-containing protein | HDEN_RS02590 | Not Available | + | 554656 - 555816 | 42043.8 |
| hypothetical protein | HDEN_RS18260 | Not Available | + | 555863 - 556021 | 5417.28 |
| lysr family transcriptional regulator | HDEN_RS02595 | Not Available | - | 556033 - 556965 | 33793.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
