Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| antar domain-containing response regulator | HDEN_RS13930 | Not Available | - | 2902352 - 2902951 | 22511.8 |
| transporter substrate-binding domain-containing protein | HDEN_RS13935 | Not Available | - | 2902961 - 2904115 | 42540.4 |
| sensor histidine kinase | HDEN_RS13940 | Not Available | - | 2904248 - 2905615 | 48984.0 |
| response regulator transcription factor | HDEN_RS13945 | Not Available | - | 2905624 - 2906313 | 25295.4 |
| efflux rnd transporter periplasmic adaptor subunit | HDEN_RS13950 | Not Available | + | 2906546 - 2907487 | 32962.6 |
| efflux rnd transporter permease subunit | HDEN_RS13955 | Not Available | + | 2907491 - 2910655 | 111937.0 |
| duf3240 family protein | HDEN_RS13960 | Not Available | + | 2910586 - 2910945 | 13205.1 |
| ferric reductase-like transmembrane domain-containing protein | HDEN_RS13970 | Not Available | + | 2911764 - 2913116 | 51155.2 |
| sdr family nad(p)-dependent oxidoreductase | HDEN_RS13975 | Not Available | - | 2913284 - 2914030 | 25934.4 |
| rrf2 family transcriptional regulator | HDEN_RS13980 | Not Available | + | 2914383 - 2914937 | 20370.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
