Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit gamma/tau | HDEN_RS13490 | Not Available | - | 2804640 - 2806493 | 66564.2 |
| Ncrna_class:srp_rna | Not Available | Not Available | + | 2806605 - 2806700 | Not Available |
| glucose 1-dehydrogenase | HDEN_RS13495 | Not Available | - | 2807052 - 2807804 | 25784.2 |
| prephenate dehydratase | HDEN_RS13500 | Not Available | - | 2807810 - 2808721 | 33075.2 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | HDEN_RS13505 | Not Available | - | 2808776 - 2809525 | 26620.1 |
| c-type cytochrome | HDEN_RS13510 | Not Available | + | 2809698 - 2810267 | 19883.9 |
| extracellular solute-binding protein | HDEN_RS13515 | Not Available | + | 2810412 - 2812349 | 73013.8 |
| extracellular solute-binding protein | HDEN_RS13520 | Not Available | + | 2812405 - 2814258 | 69157.5 |
| microcin c abc transporter permease yejb | HDEN_RS13525 | Not Available | + | 2814258 - 2815379 | 41094.5 |
| abc transporter permease | HDEN_RS13530 | Not Available | + | 2815385 - 2816596 | 44902.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
