Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | HDEN_RS13440 | Not Available | + | 2794285 - 2797464 | 113838.0 |
| gtp cyclohydrolase i fole | HDEN_RS13445 | Not Available | + | 2797593 - 2798186 | 22387.9 |
| trna pseudouridine(38-40) synthase trua | HDEN_RS13450 | Not Available | - | 2798200 - 2798940 | 27175.4 |
| hypothetical protein | HDEN_RS13455 | Not Available | - | 2798998 - 2799435 | 15619.4 |
| methionyl-trna formyltransferase | HDEN_RS13460 | Not Available | - | 2799539 - 2800465 | 32517.4 |
| peptide deformylase | HDEN_RS13465 | Not Available | - | 2800544 - 2801059 | 18853.0 |
| nad-dependent epimerase/dehydratase family protein | HDEN_RS13470 | Not Available | - | 2801091 - 2802065 | 34289.7 |
| mate family efflux transporter | HDEN_RS13475 | Not Available | - | 2802104 - 2803501 | 48832.7 |
| recombination mediator recr | HDEN_RS13480 | Not Available | - | 2803556 - 2804161 | 21506.0 |
| ybab/ebfc family nucleoid-associated protein | HDEN_RS13485 | Not Available | - | 2804281 - 2804601 | 11502.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
