Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | HDEN_RS13245 | Not Available | - | 2754569 - 2755330 | 26808.0 |
| duf2796 domain-containing protein | HDEN_RS13250 | Not Available | - | 2755334 - 2755906 | 20228.8 |
| hypothetical protein | HDEN_RS13255 | Not Available | - | 2756059 - 2756442 | 13882.6 |
| sensor histidine kinase | HDEN_RS13260 | Not Available | + | 2756746 - 2758704 | 70460.0 |
| duf1328 domain-containing protein | HDEN_RS18015 | Not Available | + | 2758995 - 2759168 | 6050.78 |
| response regulator | HDEN_RS13270 | Not Available | - | 2759259 - 2760065 | 29055.9 |
| sigma-70 family rna polymerase sigma factor | HDEN_RS13275 | Not Available | - | 2760138 - 2760701 | 20705.7 |
| nepr family anti-sigma factor | HDEN_RS13280 | Not Available | - | 2760698 - 2760922 | 8175.49 |
| cobyrinate a,c-diamide synthase | HDEN_RS13285 | Not Available | - | 2761086 - 2762408 | 46764.9 |
| precorrin-4 c(11)-methyltransferase | HDEN_RS13290 | Not Available | - | 2762422 - 2763177 | 26780.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
