Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| potassium transporter kup | HDEN_RS12995 | Not Available | - | 2693911 - 2695821 | 70011.7 |
| m3 family oligoendopeptidase | HDEN_RS13000 | Not Available | - | 2696006 - 2697853 | 69202.8 |
| sigma-54-dependent transcriptional regulator | HDEN_RS13005 | Not Available | + | 2698203 - 2699711 | 54705.4 |
| hypothetical protein | HDEN_RS18390 | Not Available | - | 2699913 - 2700158 | 8886.73 |
| murein l,d-transpeptidase | HDEN_RS13010 | Not Available | + | 2700145 - 2702004 | 68322.9 |
| duf882 domain-containing protein | HDEN_RS13015 | Not Available | + | 2702229 - 2703773 | 55457.2 |
| lysr substrate-binding domain-containing protein | HDEN_RS13020 | Not Available | - | 2703810 - 2704739 | 34023.7 |
| duf2312 domain-containing protein | HDEN_RS13025 | Not Available | - | 2705040 - 2705333 | 11187.3 |
| duf1244 domain-containing protein | HDEN_RS13030 | Not Available | - | 2705638 - 2705946 | 11622.8 |
| glycerate kinase | HDEN_RS13035 | Not Available | + | 2706130 - 2707425 | 44172.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
