Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase | HDEN_RS12895 | Not Available | + | 2675176 - 2676801 | 59467.1 |
| hypothetical protein | HDEN_RS12900 | Not Available | - | 2676860 - 2677132 | 10148.3 |
| zinc metallochaperone gtpase ziga | HDEN_RS12905 | Not Available | + | 2677442 - 2678701 | 46866.2 |
| catalase family peroxidase | HDEN_RS12910 | Not Available | + | 2678902 - 2679882 | 34774.1 |
| srpbcc domain-containing protein | HDEN_RS12915 | Not Available | - | 2679950 - 2680456 | 18985.5 |
| arsr/smtb family transcription factor | HDEN_RS12920 | Not Available | - | 2680434 - 2680790 | 13358.9 |
| ydch family protein | HDEN_RS18010 | Not Available | - | 2681039 - 2681215 | 6869.31 |
| duf465 domain-containing protein | HDEN_RS12930 | Not Available | + | 2681468 - 2681674 | 8146.05 |
| ligase-associated dna damage response exonuclease | HDEN_RS12935 | Not Available | + | 2681731 - 2682750 | 36960.3 |
| cisplatin damage response atp-dependent dna ligase | HDEN_RS12940 | Not Available | + | 2682753 - 2684732 | 74036.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
