Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit beta | HDEN_RS11450 | Not Available | - | 2377760 - 2378059 | 11199.5 |
| signal peptide peptidase sppa | HDEN_RS11455 | Not Available | - | 2378093 - 2379058 | 34006.0 |
| 30s ribosomal protein s1 | HDEN_RS11460 | Not Available | - | 2379249 - 2380967 | 62599.9 |
| hypothetical protein | HDEN_RS17785 | Not Available | - | 2381265 - 2382380 | 40439.3 |
| hypothetical protein | HDEN_RS11470 | Not Available | + | 2382937 - 2383200 | 9371.3 |
| (d)cmp kinase | HDEN_RS11475 | Not Available | - | 2383236 - 2383865 | 21990.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | HDEN_RS11480 | Not Available | - | 2383874 - 2385214 | 47315.4 |
| tigr02300 family protein | HDEN_RS11485 | Not Available | + | 2385434 - 2385811 | 13173.9 |
| Trna-ala | Not Available | Not Available | + | 2385908 - 2385983 | Not Available |
| giy-yig nuclease family protein | HDEN_RS11495 | Not Available | + | 2386125 - 2386364 | 9136.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
