Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | HDEN_RS11055 | Not Available | - | 2295606 - 2296373 | 28953.3 |
| holo-acp synthase | HDEN_RS11060 | Not Available | - | 2296572 - 2296985 | 14849.9 |
| pyridoxine 5'-phosphate synthase | HDEN_RS11065 | Not Available | - | 2296982 - 2297800 | 29395.5 |
| duf2062 domain-containing protein | HDEN_RS11070 | Not Available | - | 2297848 - 2298342 | 17769.0 |
| rela/spot family protein | HDEN_RS11075 | Not Available | - | 2298468 - 2300687 | 82955.2 |
| dna-directed rna polymerase subunit omega | HDEN_RS11080 | Not Available | - | 2300791 - 2301249 | 16824.9 |
| nyn domain-containing protein | HDEN_RS11085 | Not Available | + | 2301632 - 2302273 | 23914.2 |
| uracil-dna glycosylase | HDEN_RS11090 | Not Available | + | 2302305 - 2302964 | 24133.1 |
| peroxiredoxin | HDEN_RS11095 | Not Available | - | 2302945 - 2303514 | 20619.3 |
| ssra-binding protein smpb | HDEN_RS11100 | Not Available | - | 2303518 - 2303991 | 17978.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
