Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HDEN_RS10610 | Not Available | - | 2206107 - 2206442 | 11781.2 |
| gsph/fimt family pseudopilin | HDEN_RS10615 | Not Available | - | 2206501 - 2206977 | 16834.2 |
| type ii secretion system major pseudopilin gspg | HDEN_RS10620 | Not Available | - | 2206958 - 2207425 | 17205.7 |
| type ii secretion system f family protein | HDEN_RS10625 | Not Available | - | 2207439 - 2208650 | 43385.8 |
| gspe/pule family protein | HDEN_RS10630 | Not Available | - | 2208753 - 2210417 | 60546.1 |
| type ii secretion system secretin gspd | HDEN_RS10635 | Not Available | + | 2210849 - 2213170 | 81913.2 |
| prepilin peptidase | HDEN_RS10640 | Not Available | - | 2213217 - 2213771 | 19508.2 |
| arac family transcriptional regulator | HDEN_RS10645 | Not Available | - | 2213857 - 2214897 | 37821.3 |
| carboxylesterase/lipase family protein | HDEN_RS10650 | Not Available | + | 2215447 - 2217075 | 57061.8 |
| carboxylesterase/lipase family protein | HDEN_RS10655 | Not Available | + | 2217443 - 2219173 | 61347.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
