Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent isocitrate dehydrogenase | HDEN_RS10460 | Not Available | + | 2172922 - 2174142 | 45193.0 |
| class i sam-dependent dna methyltransferase | HDEN_RS10465 | Not Available | + | 2174177 - 2174785 | 22330.3 |
| hypothetical protein | HDEN_RS10470 | Not Available | - | 2174945 - 2175430 | 17315.8 |
| alanine--trna ligase | HDEN_RS10475 | Not Available | - | 2175666 - 2178359 | 96474.8 |
| recombinase reca | HDEN_RS10480 | Not Available | - | 2178814 - 2179947 | 40635.1 |
| formaldehyde-activating enzyme | HDEN_RS10485 | Not Available | + | 2180153 - 2180710 | 20019.3 |
| pas domain-containing sensor histidine kinase | HDEN_RS10490 | Not Available | - | 2181426 - 2184032 | 93408.0 |
| flagellar biosynthetic protein flio | HDEN_RS10495 | Not Available | + | 2184203 - 2184592 | 14088.1 |
| hypothetical protein | HDEN_RS10500 | Not Available | - | 2184704 - 2184973 | 9418.11 |
| rna polymerase-binding protein dksa | HDEN_RS18565 | Not Available | - | 2185252 - 2185974 | 26175.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
