Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| quinolinate synthase nada | HDEN_RS09850 | Not Available | + | 2037797 - 2038858 | 39069.4 |
| l-aspartate oxidase | HDEN_RS09855 | Not Available | + | 2038892 - 2040544 | 57586.8 |
| carboxylating nicotinate-nucleotide diphosphorylase | HDEN_RS09860 | Not Available | + | 2040541 - 2041434 | 30602.9 |
| hypothetical protein | HDEN_RS09865 | Not Available | + | 2041522 - 2041749 | 8553.56 |
| pyruvate, phosphate dikinase | HDEN_RS09870 | Not Available | - | 2041772 - 2044498 | 98441.5 |
| dipeptidase | HDEN_RS09875 | Not Available | + | 2044624 - 2046027 | 49868.5 |
| ribonuclease t2 family protein | HDEN_RS09880 | Not Available | + | 2046080 - 2047036 | 35374.4 |
| hypothetical protein | HDEN_RS09885 | Not Available | - | 2047096 - 2047851 | 27209.9 |
| torf family putative porin | HDEN_RS09890 | Not Available | - | 2048001 - 2048741 | 26574.1 |
| sdr family oxidoreductase | HDEN_RS09895 | Not Available | + | 2049103 - 2049843 | 26661.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
