Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocase tata/tate family subunit | HDEN_RS06220 | Not Available | + | 1289571 - 1289780 | 7573.28 |
| sec-independent protein translocase protein tatb | HDEN_RS06225 | Not Available | + | 1289815 - 1290198 | 13920.6 |
| twin-arginine translocase subunit tatc | HDEN_RS06230 | Not Available | + | 1290202 - 1291032 | 30446.1 |
| serine--trna ligase | HDEN_RS06235 | Not Available | + | 1291121 - 1292509 | 50685.7 |
| hypothetical protein | HDEN_RS06240 | Not Available | + | 1292509 - 1292760 | 9355.11 |
| 5'/3'-nucleotidase sure | HDEN_RS06245 | Not Available | + | 1292762 - 1293526 | 27452.9 |
| lysm peptidoglycan-binding domain-containing m23 family metallopeptidase | HDEN_RS06250 | Not Available | + | 1293811 - 1295397 | 53930.3 |
| atp-binding protein | HDEN_RS06255 | Not Available | - | 1295566 - 1296429 | 32084.1 |
| preprotein translocase subunit yajc | HDEN_RS06260 | Not Available | + | 1296638 - 1296973 | 12168.0 |
| protein translocase subunit secd | HDEN_RS06265 | Not Available | + | 1297061 - 1298683 | 57955.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
