Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Hyphomicrobiaceae
Genus
Hyphomicrobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Hyphomicrobiaceae |
| Genus | Hyphomicrobium |
| Species | Hyphomicrobium denitrificans |
| Strain | ATCC 51888 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Hyphomicrobium denitrificans ATCC 51888
Accession NumberNC_014313.1
Gene Summary
Adenine Count
700565 bp
Thymine Count
725459 bp
Guanine Count
1136928 bp
Cytosine Count
1076017 bp
Genome Length
3638969 bp
Protein-coding Genes
3429 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome | HDEN_RS05680 | Not Available | - | 1195731 - 1196273 | 19115.9 |
| sulfite dehydrogenase | HDEN_RS05685 | Not Available | - | 1196260 - 1197558 | 47723.6 |
| quinoprotein dehydrogenase-associated soxyz-like carrier | HDEN_RS05690 | Not Available | - | 1197577 - 1198392 | 28832.1 |
| tetr/acrr family transcriptional regulator | HDEN_RS05695 | Not Available | - | 1198582 - 1199229 | 24317.5 |
| efflux rnd transporter periplasmic adaptor subunit | HDEN_RS05700 | Not Available | + | 1199413 - 1200648 | 43972.6 |
| efflux rnd transporter permease subunit | HDEN_RS05705 | Not Available | + | 1200662 - 1203826 | 113193.0 |
| tetratricopeptide repeat protein | HDEN_RS05710 | Not Available | + | 1203952 - 1206408 | 90834.1 |
| extensin family protein | HDEN_RS05715 | Not Available | - | 1206412 - 1207533 | 40007.1 |
| helix-turn-helix domain-containing protein | HDEN_RS05720 | Not Available | - | 1207731 - 1208711 | 35564.2 |
| marr family winged helix-turn-helix transcriptional regulator | HDEN_RS05725 | Not Available | - | 1208875 - 1209315 | 16021.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
